Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MTRQ99707 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 HBZP1-201ENST00000354915 429 ntBASIC20.53■□□□□ 0.88
MTRQ99707 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 MIR149-201ENST00000384879 89 ntBASIC20.53■□□□□ 0.88
MTRQ99707 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 ZNF444P1-201ENST00000559497 298 ntBASIC20.53■□□□□ 0.88
MTRQ99707 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
MTRQ99707 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.53■□□□□ 0.88
MTRQ99707 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MTRQ99707 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.53■□□□□ 0.88
MTRQ99707 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.53■□□□□ 0.88
MTRQ99707 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MTRQ99707 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MTRQ99707 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.52■□□□□ 0.88
MTRQ99707 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MTRQ99707 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.52■□□□□ 0.88
MTRQ99707 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
MTRQ99707 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MTRQ99707 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MTRQ99707 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.52■□□□□ 0.88
MTRQ99707 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MTRQ99707 GMCL1P1-201ENST00000463439 1581 ntBASIC20.52■□□□□ 0.88
MTRQ99707 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MTRQ99707 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MTRQ99707 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MTRQ99707 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
MTRQ99707 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.52■□□□□ 0.88
MTRQ99707 FAM86EP-206ENST00000510506 987 ntBASIC20.52■□□□□ 0.88
MTRQ99707 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.52■□□□□ 0.88
MTRQ99707 MIR3180-4-201ENST00000582223 153 ntBASIC20.52■□□□□ 0.88
MTRQ99707 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
MTRQ99707 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.52■□□□□ 0.88
MTRQ99707 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MTRQ99707 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
MTRQ99707 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MTRQ99707 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
MTRQ99707 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MTRQ99707 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MTRQ99707 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MTRQ99707 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.52■□□□□ 0.87
MTRQ99707 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.51■□□□□ 0.87
MTRQ99707 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.51■□□□□ 0.87
MTRQ99707 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.51■□□□□ 0.87
MTRQ99707 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.51■□□□□ 0.87
MTRQ99707 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.51■□□□□ 0.87
MTRQ99707 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 AC079602.3-201ENST00000623931 403 ntBASIC20.51■□□□□ 0.87
MTRQ99707 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.51■□□□□ 0.87
MTRQ99707 AL358472.4-201ENST00000633140 710 ntBASIC20.51■□□□□ 0.87
MTRQ99707 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.51■□□□□ 0.87
MTRQ99707 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
MTRQ99707 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.51■□□□□ 0.87
MTRQ99707 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MTRQ99707 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MTRQ99707 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.5■□□□□ 0.87
MTRQ99707 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.5■□□□□ 0.87
MTRQ99707 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTRQ99707 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTRQ99707 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTRQ99707 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTRQ99707 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MTRQ99707 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTRQ99707 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MTRQ99707 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTRQ99707 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTRQ99707 VENTXP5-201ENST00000523979 775 ntBASIC20.5■□□□□ 0.87
MTRQ99707 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.5■□□□□ 0.87
MTRQ99707 AL136038.3-201ENST00000561909 1096 ntBASIC20.5■□□□□ 0.87
MTRQ99707 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.5■□□□□ 0.87
MTRQ99707 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTRQ99707 AC138028.4-201ENST00000564984 1845 ntBASIC20.5■□□□□ 0.87
MTRQ99707 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTRQ99707 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MTRQ99707 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.5■□□□□ 0.87
MTRQ99707 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MTRQ99707 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MTRQ99707 AC005332.1-201ENST00000577698 1310 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms