Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.31□□□□□ -0.28
MUC4Q99102 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.31□□□□□ -0.28
MUC4Q99102 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.31□□□□□ -0.28
MUC4Q99102 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
MUC4Q99102 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.31□□□□□ -0.28
MUC4Q99102 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.31□□□□□ -0.28
MUC4Q99102 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
MUC4Q99102 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
MUC4Q99102 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
MUC4Q99102 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.31□□□□□ -0.28
MUC4Q99102 KRT126P-201ENST00000549467 1181 ntBASIC13.31□□□□□ -0.28
MUC4Q99102 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.31□□□□□ -0.28
MUC4Q99102 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.31□□□□□ -0.28
MUC4Q99102 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.31□□□□□ -0.28
MUC4Q99102 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.31□□□□□ -0.28
MUC4Q99102 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
MUC4Q99102 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.31□□□□□ -0.28
MUC4Q99102 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.31□□□□□ -0.28
MUC4Q99102 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
MUC4Q99102 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MUC4Q99102 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
MUC4Q99102 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
MUC4Q99102 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
MUC4Q99102 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.3□□□□□ -0.28
MUC4Q99102 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
MUC4Q99102 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.3□□□□□ -0.28
MUC4Q99102 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.3□□□□□ -0.28
MUC4Q99102 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
MUC4Q99102 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.3□□□□□ -0.28
MUC4Q99102 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.3□□□□□ -0.28
MUC4Q99102 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.3□□□□□ -0.28
MUC4Q99102 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.3□□□□□ -0.28
MUC4Q99102 FITM1-202ENST00000559294 800 ntBASIC13.3□□□□□ -0.28
MUC4Q99102 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
MUC4Q99102 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.3□□□□□ -0.28
MUC4Q99102 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
MUC4Q99102 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
MUC4Q99102 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
MUC4Q99102 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.3□□□□□ -0.28
MUC4Q99102 AL023284.2-201ENST00000405850 579 ntBASIC13.3□□□□□ -0.28
MUC4Q99102 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.3□□□□□ -0.28
MUC4Q99102 DUSP5P1-201ENST00000441325 1139 ntBASIC13.3□□□□□ -0.28
MUC4Q99102 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.3□□□□□ -0.28
MUC4Q99102 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.3□□□□□ -0.28
MUC4Q99102 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
MUC4Q99102 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms