Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.36■□□□□ 0.21
SPENQ96T58 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.36■□□□□ 0.21
SPENQ96T58 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.36■□□□□ 0.21
SPENQ96T58 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.36■□□□□ 0.21
SPENQ96T58 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.36■□□□□ 0.21
SPENQ96T58 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.36■□□□□ 0.21
SPENQ96T58 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.36■□□□□ 0.21
SPENQ96T58 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SPENQ96T58 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPENQ96T58 LINC00602-201ENST00000629776 2065 ntBASIC16.36■□□□□ 0.21
SPENQ96T58 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.35■□□□□ 0.21
SPENQ96T58 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.35■□□□□ 0.21
SPENQ96T58 AC092910.1-201ENST00000482027 1129 ntBASIC16.35■□□□□ 0.21
SPENQ96T58 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.35■□□□□ 0.21
SPENQ96T58 RNA5SP415-201ENST00000517246 115 ntBASIC16.35■□□□□ 0.21
SPENQ96T58 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.35■□□□□ 0.21
SPENQ96T58 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPENQ96T58 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.35■□□□□ 0.21
SPENQ96T58 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SPENQ96T58 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
SPENQ96T58 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPENQ96T58 AC004832.2-201ENST00000426397 482 ntBASIC16.35■□□□□ 0.21
SPENQ96T58 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.35■□□□□ 0.21
SPENQ96T58 AC113404.2-201ENST00000507884 177 ntBASIC16.35■□□□□ 0.21
SPENQ96T58 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.35■□□□□ 0.21
SPENQ96T58 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPENQ96T58 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.35■□□□□ 0.21
SPENQ96T58 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPENQ96T58 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPENQ96T58 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPENQ96T58 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPENQ96T58 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.35■□□□□ 0.21
SPENQ96T58 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SPENQ96T58 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.35■□□□□ 0.21
SPENQ96T58 AL356309.3-201ENST00000624132 1934 ntBASIC16.35■□□□□ 0.21
SPENQ96T58 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPENQ96T58 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
SPENQ96T58 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPENQ96T58 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.35■□□□□ 0.21
SPENQ96T58 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
SPENQ96T58 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPENQ96T58 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPENQ96T58 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.34■□□□□ 0.21
SPENQ96T58 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SPENQ96T58 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.34■□□□□ 0.21
SPENQ96T58 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.34■□□□□ 0.21
SPENQ96T58 SPCS2P1-201ENST00000561636 679 ntBASIC16.34■□□□□ 0.21
SPENQ96T58 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.34■□□□□ 0.21
SPENQ96T58 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
SPENQ96T58 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SPENQ96T58 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPENQ96T58 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPENQ96T58 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPENQ96T58 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SPENQ96T58 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.34■□□□□ 0.21
SPENQ96T58 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPENQ96T58 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPENQ96T58 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.34■□□□□ 0.21
SPENQ96T58 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.34■□□□□ 0.21
SPENQ96T58 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.34■□□□□ 0.21
SPENQ96T58 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.34■□□□□ 0.21
SPENQ96T58 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.34■□□□□ 0.21
SPENQ96T58 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPENQ96T58 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPENQ96T58 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.33■□□□□ 0.21
SPENQ96T58 AC007967.2-201ENST00000432613 625 ntBASIC16.33■□□□□ 0.21
SPENQ96T58 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.33■□□□□ 0.21
SPENQ96T58 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
SPENQ96T58 MIR4469-201ENST00000583919 79 ntBASIC16.33■□□□□ 0.21
SPENQ96T58 AC073592.4-201ENST00000623827 446 ntBASIC16.33■□□□□ 0.21
SPENQ96T58 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.21
SPENQ96T58 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPENQ96T58 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPENQ96T58 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPENQ96T58 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.33■□□□□ 0.2
SPENQ96T58 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.33■□□□□ 0.2
SPENQ96T58 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.33■□□□□ 0.2
SPENQ96T58 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPENQ96T58 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPENQ96T58 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.33■□□□□ 0.2
SPENQ96T58 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPENQ96T58 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPENQ96T58 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.33■□□□□ 0.2
SPENQ96T58 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.33■□□□□ 0.2
SPENQ96T58 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPENQ96T58 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SPENQ96T58 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms