Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC30■■■□□ 2.39
IFT140Q96RY7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC30■■■□□ 2.39
IFT140Q96RY7 LINC01126-201ENST00000623515 1646 ntBASIC30■■■□□ 2.39
IFT140Q96RY7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC29.99■■■□□ 2.39
IFT140Q96RY7 CD63-210ENST00000550776 870 ntTSL 5 BASIC29.99■■■□□ 2.39
IFT140Q96RY7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
IFT140Q96RY7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
IFT140Q96RY7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
IFT140Q96RY7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
IFT140Q96RY7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC29.99■■■□□ 2.39
IFT140Q96RY7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC29.99■■■□□ 2.39
IFT140Q96RY7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
IFT140Q96RY7 AC109322.1-201ENST00000524499 1264 ntBASIC29.99■■■□□ 2.39
IFT140Q96RY7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC29.99■■■□□ 2.39
IFT140Q96RY7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
IFT140Q96RY7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC29.99■■■□□ 2.39
IFT140Q96RY7 AL390955.2-201ENST00000603032 514 ntBASIC29.99■■■□□ 2.39
IFT140Q96RY7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
IFT140Q96RY7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
IFT140Q96RY7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
IFT140Q96RY7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
IFT140Q96RY7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
IFT140Q96RY7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
IFT140Q96RY7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
IFT140Q96RY7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
IFT140Q96RY7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
IFT140Q96RY7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC29.98■■■□□ 2.39
IFT140Q96RY7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
IFT140Q96RY7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC29.98■■■□□ 2.39
IFT140Q96RY7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
IFT140Q96RY7 AC096633.1-201ENST00000422446 749 ntBASIC29.98■■■□□ 2.39
IFT140Q96RY7 AC005034.1-201ENST00000426657 489 ntBASIC29.98■■■□□ 2.39
IFT140Q96RY7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
IFT140Q96RY7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC29.98■■■□□ 2.39
IFT140Q96RY7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC29.98■■■□□ 2.39
IFT140Q96RY7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC29.98■■■□□ 2.39
IFT140Q96RY7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC29.98■■■□□ 2.39
IFT140Q96RY7 AC004835.2-201ENST00000603762 682 ntBASIC29.98■■■□□ 2.39
IFT140Q96RY7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
IFT140Q96RY7 AC012645.4-201ENST00000610691 1061 ntBASIC29.98■■■□□ 2.39
IFT140Q96RY7 AC091812.2-201ENST00000619081 385 ntBASIC29.98■■■□□ 2.39
IFT140Q96RY7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
IFT140Q96RY7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
IFT140Q96RY7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC29.97■■■□□ 2.39
IFT140Q96RY7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
IFT140Q96RY7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
IFT140Q96RY7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC29.97■■■□□ 2.39
IFT140Q96RY7 PC-214ENST00000628663 1470 ntTSL 5 BASIC29.97■■■□□ 2.39
IFT140Q96RY7 NCF1C-201ENST00000438382 1427 ntBASIC29.97■■■□□ 2.39
IFT140Q96RY7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
IFT140Q96RY7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
IFT140Q96RY7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
IFT140Q96RY7 AC004461.1-201ENST00000412461 403 ntBASIC29.97■■■□□ 2.39
IFT140Q96RY7 AC004790.2-201ENST00000623588 572 ntBASIC29.97■■■□□ 2.39
IFT140Q96RY7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
IFT140Q96RY7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
IFT140Q96RY7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC29.96■■■□□ 2.39
IFT140Q96RY7 AC007375.3-201ENST00000600936 2314 ntBASIC29.96■■■□□ 2.39
IFT140Q96RY7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC29.96■■■□□ 2.39
IFT140Q96RY7 AC015911.4-201ENST00000588022 1070 ntBASIC29.96■■■□□ 2.39
IFT140Q96RY7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
IFT140Q96RY7 AL805961.1-202ENST00000641562 540 ntBASIC29.96■■■□□ 2.39
IFT140Q96RY7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC29.96■■■□□ 2.39
IFT140Q96RY7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC29.96■■■□□ 2.39
IFT140Q96RY7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC29.95■■■□□ 2.39
IFT140Q96RY7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
IFT140Q96RY7 RHOQP3-201ENST00000437982 621 ntBASIC29.95■■■□□ 2.39
IFT140Q96RY7 AC023141.5-201ENST00000458585 616 ntBASIC29.95■■■□□ 2.39
IFT140Q96RY7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC29.95■■■□□ 2.39
IFT140Q96RY7 AC004877.2-201ENST00000623941 599 ntBASIC29.95■■■□□ 2.39
IFT140Q96RY7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
IFT140Q96RY7 AC010460.3-201ENST00000511359 1579 ntBASIC29.95■■■□□ 2.38
IFT140Q96RY7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
IFT140Q96RY7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
IFT140Q96RY7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
IFT140Q96RY7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
IFT140Q96RY7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
IFT140Q96RY7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
IFT140Q96RY7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC29.94■■■□□ 2.38
IFT140Q96RY7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC29.94■■■□□ 2.38
IFT140Q96RY7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC29.94■■■□□ 2.38
IFT140Q96RY7 AC092902.6-201ENST00000641783 218 ntBASIC29.94■■■□□ 2.38
IFT140Q96RY7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC29.94■■■□□ 2.38
IFT140Q96RY7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
IFT140Q96RY7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC29.94■■■□□ 2.38
IFT140Q96RY7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
IFT140Q96RY7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
IFT140Q96RY7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
IFT140Q96RY7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
IFT140Q96RY7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC29.94■■■□□ 2.38
IFT140Q96RY7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
IFT140Q96RY7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
IFT140Q96RY7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
IFT140Q96RY7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC29.94■■■□□ 2.38
IFT140Q96RY7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
IFT140Q96RY7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
IFT140Q96RY7 AC015922.1-201ENST00000421102 1152 ntBASIC29.93■■■□□ 2.38
IFT140Q96RY7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC29.93■■■□□ 2.38
IFT140Q96RY7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC29.93■■■□□ 2.38
IFT140Q96RY7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC29.93■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms