Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 CROCCP2-202ENST00000412962 2773 ntBASIC17.18■□□□□ 0.34
NR1H4Q96RI1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NR1H4Q96RI1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 AL096828.2-201ENST00000567259 1965 ntBASIC17.17■□□□□ 0.34
NR1H4Q96RI1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.17■□□□□ 0.34
NR1H4Q96RI1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 MYCNOS-205ENST00000641950 531 ntBASIC17.17■□□□□ 0.34
NR1H4Q96RI1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H4Q96RI1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 LINC02199-201ENST00000506655 2702 ntBASIC17.16■□□□□ 0.34
NR1H4Q96RI1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.16■□□□□ 0.34
NR1H4Q96RI1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 KRT8P45-201ENST00000414328 1447 ntBASIC17.15■□□□□ 0.34
NR1H4Q96RI1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 AC034268.1-201ENST00000441047 882 ntBASIC17.15■□□□□ 0.34
NR1H4Q96RI1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NR1H4Q96RI1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms