Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 KRT18P65-201ENST00000439811 1286 ntBASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 NKAPP1-205ENST00000585790 367 ntBASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 MTDHP5-201ENST00000598980 586 ntBASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NECTIN4Q96NY8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 AL024508.2-201ENST00000607749 1894 ntBASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
NECTIN4Q96NY8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 AC022898.2-201ENST00000616822 1312 ntBASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.79■□□□□ 0.6
NECTIN4Q96NY8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 PGM5P2-202ENST00000637225 1043 ntBASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms