Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 TSPY20P-201ENST00000450910 630 ntBASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC47A1Q96FL8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC47A1Q96FL8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SLC47A1Q96FL8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SLC47A1Q96FL8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC47A1Q96FL8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 AC011298.2-201ENST00000617989 482 ntBASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC47A1Q96FL8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 AC108860.2-201ENST00000562760 2183 ntBASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 AC080080.1-201ENST00000625121 2420 ntBASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC47A1Q96FL8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms