Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN23Q96B33 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN23Q96B33 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 AC007967.3-201ENST00000434308 558 ntBASIC18.11■□□□□ 0.49
CLDN23Q96B33 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 AC136632.2-201ENST00000512891 861 ntBASIC18.11■□□□□ 0.49
CLDN23Q96B33 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 SNHG9-202ENST00000564014 471 ntBASIC18.11■□□□□ 0.49
CLDN23Q96B33 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 AC099343.3-201ENST00000605834 2503 ntBASIC18.11■□□□□ 0.49
CLDN23Q96B33 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CLDN23Q96B33 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN23Q96B33 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN23Q96B33 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLDN23Q96B33 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 AC002310.6-201ENST00000624451 1377 ntBASIC18.1■□□□□ 0.49
CLDN23Q96B33 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN23Q96B33 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.1■□□□□ 0.49
CLDN23Q96B33 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN23Q96B33 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN23Q96B33 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.1■□□□□ 0.49
CLDN23Q96B33 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN23Q96B33 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN23Q96B33 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN23Q96B33 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN23Q96B33 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLDN23Q96B33 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN23Q96B33 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 SIGLEC16-201ENST00000599858 1437 ntBASIC18.09■□□□□ 0.49
CLDN23Q96B33 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 MIR4469-201ENST00000583919 79 ntBASIC18.09■□□□□ 0.49
CLDN23Q96B33 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN23Q96B33 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN23Q96B33 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CLDN23Q96B33 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.08■□□□□ 0.49
CLDN23Q96B33 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN23Q96B33 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.08■□□□□ 0.49
CLDN23Q96B33 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.08■□□□□ 0.49
CLDN23Q96B33 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN23Q96B33 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms