Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCE1Q969G3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 MIR149-201ENST00000384879 89 ntBASIC20.54■□□□□ 0.88
SMARCE1Q969G3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 AP003071.4-201ENST00000562276 1284 ntBASIC20.54■□□□□ 0.88
SMARCE1Q969G3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCE1Q969G3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 Z99916.2-201ENST00000604037 246 ntBASIC20.53■□□□□ 0.88
SMARCE1Q969G3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 AL023803.3-201ENST00000615559 522 ntBASIC20.53■□□□□ 0.88
SMARCE1Q969G3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCE1Q969G3 HOXB1-202ENST00000577092 1414 ntBASIC20.53■□□□□ 0.88
SMARCE1Q969G3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 KRT18P23-201ENST00000435622 1283 ntBASIC20.52■□□□□ 0.88
SMARCE1Q969G3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 AP003041.3-201ENST00000527151 707 ntBASIC20.52■□□□□ 0.88
SMARCE1Q969G3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCE1Q969G3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCE1Q969G3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCE1Q969G3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCE1Q969G3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCE1Q969G3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.52■□□□□ 0.87
SMARCE1Q969G3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCE1Q969G3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCE1Q969G3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms