Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 AC113404.2-201ENST00000507884 177 ntBASIC18.07■□□□□ 0.48
SCAMP4Q969E2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.07■□□□□ 0.48
SCAMP4Q969E2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 CHCHD2P8-201ENST00000429873 447 ntBASIC18.06■□□□□ 0.48
SCAMP4Q969E2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 NPAP1P7-201ENST00000613027 823 ntBASIC18.06■□□□□ 0.48
SCAMP4Q969E2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCAMP4Q969E2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 AC092119.3-201ENST00000612618 583 ntBASIC18.05■□□□□ 0.48
SCAMP4Q969E2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 AC093677.2-201ENST00000600169 1863 ntBASIC18.05■□□□□ 0.48
SCAMP4Q969E2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCAMP4Q969E2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 ATP5G2P1-201ENST00000433580 426 ntBASIC18.04■□□□□ 0.48
SCAMP4Q969E2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 AP002414.4-201ENST00000589764 1148 ntBASIC18.04■□□□□ 0.48
SCAMP4Q969E2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCAMP4Q969E2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms