Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 AC112698.1-201ENST00000510299 916 ntBASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 IGHV3-22-201ENST00000520721 359 ntBASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 HLA-J-201ENST00000462773 1622 ntBASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 AC145285.3-201ENST00000564603 959 ntBASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 AC104109.2-201ENST00000602919 1418 ntBASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF4Q8WZA2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 OR7E14P-202ENST00000530490 1290 ntBASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 CD63-204ENST00000546939 779 ntTSL 3 BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF4Q8WZA2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 AL139288.1-201ENST00000623748 933 ntBASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RAPGEF4Q8WZA2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 AC025062.2-201ENST00000605477 670 ntBASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAPGEF4Q8WZA2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms