Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 BX664615.1-201ENST00000443558 458 ntBASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 AL121894.2-201ENST00000602977 491 ntBASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATRIPQ8WXE1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 C1QL1P1-201ENST00000568105 661 ntBASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 AC080080.1-201ENST00000625121 2420 ntBASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATRIPQ8WXE1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 AC128688.1-201ENST00000487626 519 ntBASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 AC022616.7-201ENST00000525383 220 ntBASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 EGLN1P1-201ENST00000531623 762 ntBASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATRIPQ8WXE1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms