Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.43■■□□□ 1.02
STAG1Q8WVM7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 CHCHD2P8-201ENST00000429873 447 ntBASIC21.42■■□□□ 1.02
STAG1Q8WVM7 AP002383.4-201ENST00000442518 975 ntBASIC21.42■■□□□ 1.02
STAG1Q8WVM7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 RN7SL606P-201ENST00000472779 293 ntBASIC21.42■■□□□ 1.02
STAG1Q8WVM7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
STAG1Q8WVM7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 AC092119.3-201ENST00000612618 583 ntBASIC21.41■■□□□ 1.02
STAG1Q8WVM7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
STAG1Q8WVM7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 KRT126P-201ENST00000549467 1181 ntBASIC21.4■■□□□ 1.02
STAG1Q8WVM7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 MIR3180-1-201ENST00000580374 94 ntBASIC21.4■■□□□ 1.02
STAG1Q8WVM7 AC090616.6-201ENST00000582640 721 ntBASIC21.4■■□□□ 1.02
STAG1Q8WVM7 MIR3180-3-201ENST00000584616 94 ntBASIC21.4■■□□□ 1.02
STAG1Q8WVM7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 CLEC4GP1-201ENST00000596555 870 ntBASIC21.4■■□□□ 1.02
STAG1Q8WVM7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
STAG1Q8WVM7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
STAG1Q8WVM7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
STAG1Q8WVM7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms