Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 NUS1P2-201ENST00000417358 873 ntBASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 AC079781.3-201ENST00000449110 356 ntBASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 AL353801.3-201ENST00000609898 542 ntBASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SH3RF2Q8TEC5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 AC120498.9-201ENST00000339021 3867 ntBASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 TSPY12P-201ENST00000421279 868 ntBASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SH3RF2Q8TEC5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 AC009078.2-202ENST00000463353 338 ntBASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 AC104692.2-201ENST00000603054 253 ntBASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms