Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD6Q8TD26 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD6Q8TD26 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 AC009118.2-201ENST00000613275 655 ntBASIC16.29■□□□□ 0.2
CHD6Q8TD26 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD6Q8TD26 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD6Q8TD26 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD6Q8TD26 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD6Q8TD26 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD6Q8TD26 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 AC097493.3-201ENST00000509725 367 ntBASIC16.29■□□□□ 0.2
CHD6Q8TD26 RHOQP1-201ENST00000555758 579 ntBASIC16.29■□□□□ 0.2
CHD6Q8TD26 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 AC004790.2-201ENST00000623588 572 ntBASIC16.29■□□□□ 0.2
CHD6Q8TD26 AL139099.5-201ENST00000635274 300 ntBASIC16.29■□□□□ 0.2
CHD6Q8TD26 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD6Q8TD26 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD6Q8TD26 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD6Q8TD26 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 AL512638.1-201ENST00000457493 794 ntBASIC16.28■□□□□ 0.2
CHD6Q8TD26 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 KRT17P8-201ENST00000540749 863 ntBASIC16.28■□□□□ 0.2
CHD6Q8TD26 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD6Q8TD26 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD6Q8TD26 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD6Q8TD26 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD6Q8TD26 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHD6Q8TD26 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHD6Q8TD26 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHD6Q8TD26 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.27■□□□□ 0.2
CHD6Q8TD26 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHD6Q8TD26 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.27■□□□□ 0.2
CHD6Q8TD26 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.27■□□□□ 0.2
CHD6Q8TD26 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHD6Q8TD26 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.27■□□□□ 0.2
CHD6Q8TD26 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.27■□□□□ 0.2
CHD6Q8TD26 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.27■□□□□ 0.2
CHD6Q8TD26 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD6Q8TD26 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.27■□□□□ 0.2
CHD6Q8TD26 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.27■□□□□ 0.2
CHD6Q8TD26 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD6Q8TD26 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.27■□□□□ 0.2
CHD6Q8TD26 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.27■□□□□ 0.2
CHD6Q8TD26 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHD6Q8TD26 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHD6Q8TD26 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHD6Q8TD26 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.27■□□□□ 0.19
CHD6Q8TD26 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHD6Q8TD26 MIR6869-201ENST00000619434 62 ntBASIC16.27■□□□□ 0.19
CHD6Q8TD26 COX11-210ENST00000639671 696 ntBASIC16.27■□□□□ 0.19
CHD6Q8TD26 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHD6Q8TD26 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.27■□□□□ 0.19
CHD6Q8TD26 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHD6Q8TD26 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD6Q8TD26 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD6Q8TD26 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD6Q8TD26 AC132938.2-201ENST00000579188 680 ntBASIC16.26■□□□□ 0.19
CHD6Q8TD26 AC099568.2-201ENST00000609194 695 ntBASIC16.26■□□□□ 0.19
CHD6Q8TD26 AC009154.2-201ENST00000621177 724 ntBASIC16.26■□□□□ 0.19
CHD6Q8TD26 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 AL591163.1-201ENST00000641757 987 ntBASIC16.26■□□□□ 0.19
CHD6Q8TD26 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 SDHAP1-207ENST00000440850 2000 ntBASIC16.26■□□□□ 0.19
CHD6Q8TD26 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHD6Q8TD26 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD6Q8TD26 AC008677.1-201ENST00000519230 1561 ntBASIC16.26■□□□□ 0.19
CHD6Q8TD26 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 AC004890.2-204ENST00000481968 304 ntBASIC16.26■□□□□ 0.19
CHD6Q8TD26 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD6Q8TD26 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 AL357033.4-201ENST00000617703 1807 ntBASIC16.26■□□□□ 0.19
CHD6Q8TD26 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms