Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 AC009053.2-201ENST00000563701 2365 ntBASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 KRT18P6-201ENST00000555540 1265 ntBASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 AC131212.4-201ENST00000623606 975 ntBASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB3IL1Q8TBN0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 AC069152.1-201ENST00000438030 544 ntBASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB3IL1Q8TBN0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms