Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 KRT18P48-201ENST00000434763 852 ntBASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 ZNF444P1-201ENST00000559497 298 ntBASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 AC093677.2-201ENST00000600169 1863 ntBASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CCDC148Q8NFR7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 VENTXP5-201ENST00000523979 775 ntBASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC148Q8NFR7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 BICD1-207ENST00000551848 1962 ntBASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 AC135776.1-201ENST00000319817 2481 ntBASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 MIR662-201ENST00000384847 95 ntBASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC148Q8NFR7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC148Q8NFR7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.95■□□□□ 0.95
CCDC148Q8NFR7 PHGDH-209ENST00000641074 1780 ntBASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 AL031133.1-201ENST00000406807 723 ntBASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 MIR1224-201ENST00000408193 85 ntBASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 SPDYE13P-201ENST00000445314 798 ntBASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 AC113404.2-201ENST00000507884 177 ntBASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms