Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC132938.6-201ENST00000623828 1655 ntBASIC22.36■■□□□ 1.17
RTL9Q8NET4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
RTL9Q8NET4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RTL9Q8NET4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.36■■□□□ 1.17
RTL9Q8NET4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC22.36■■□□□ 1.17
RTL9Q8NET4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 AC005082.1-201ENST00000413042 2259 ntBASIC22.36■■□□□ 1.17
RTL9Q8NET4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL9Q8NET4 FGFR3P6-201ENST00000457012 610 ntBASIC22.36■■□□□ 1.17
RTL9Q8NET4 AC112698.1-201ENST00000510299 916 ntBASIC22.36■■□□□ 1.17
RTL9Q8NET4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.36■■□□□ 1.17
RTL9Q8NET4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.36■■□□□ 1.17
RTL9Q8NET4 AP001005.1-201ENST00000571755 1248 ntBASIC22.36■■□□□ 1.17
RTL9Q8NET4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC22.36■■□□□ 1.17
RTL9Q8NET4 AC139530.3-201ENST00000620344 690 ntBASIC22.36■■□□□ 1.17
RTL9Q8NET4 AC148477.8-201ENST00000624298 468 ntBASIC22.36■■□□□ 1.17
RTL9Q8NET4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
RTL9Q8NET4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.36■■□□□ 1.17
RTL9Q8NET4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.35■■□□□ 1.17
RTL9Q8NET4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RTL9Q8NET4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTL9Q8NET4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.35■■□□□ 1.17
RTL9Q8NET4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTL9Q8NET4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RTL9Q8NET4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RTL9Q8NET4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTL9Q8NET4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RTL9Q8NET4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTL9Q8NET4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
RTL9Q8NET4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTL9Q8NET4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RTL9Q8NET4 PMS2P1-201ENST00000431037 1228 ntBASIC22.35■■□□□ 1.17
RTL9Q8NET4 KRT18P67-201ENST00000432816 1264 ntBASIC22.35■■□□□ 1.17
RTL9Q8NET4 AC132008.2-207ENST00000454517 770 ntBASIC22.35■■□□□ 1.17
RTL9Q8NET4 AC018712.1-201ENST00000455767 687 ntBASIC22.35■■□□□ 1.17
RTL9Q8NET4 AP001269.4-201ENST00000609611 512 ntBASIC22.35■■□□□ 1.17
RTL9Q8NET4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.35■■□□□ 1.17
RTL9Q8NET4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
RTL9Q8NET4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RTL9Q8NET4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.35■■□□□ 1.17
RTL9Q8NET4 CROCCP3-202ENST00000420820 1947 ntBASIC22.34■■□□□ 1.17
RTL9Q8NET4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL9Q8NET4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL9Q8NET4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL9Q8NET4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL9Q8NET4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL9Q8NET4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RTL9Q8NET4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 AC064862.7-201ENST00000604520 867 ntBASIC22.34■■□□□ 1.17
RTL9Q8NET4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 AL773604.1-201ENST00000617417 272 ntBASIC22.34■■□□□ 1.17
RTL9Q8NET4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL9Q8NET4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL9Q8NET4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL9Q8NET4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.34■■□□□ 1.17
RTL9Q8NET4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTL9Q8NET4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.33■■□□□ 1.17
RTL9Q8NET4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC22.33■■□□□ 1.17
RTL9Q8NET4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.33■■□□□ 1.17
RTL9Q8NET4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTL9Q8NET4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RTL9Q8NET4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTL9Q8NET4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.33■■□□□ 1.17
RTL9Q8NET4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.33■■□□□ 1.17
RTL9Q8NET4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RTL9Q8NET4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTL9Q8NET4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.33■■□□□ 1.17
RTL9Q8NET4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTL9Q8NET4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.33■■□□□ 1.17
RTL9Q8NET4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RTL9Q8NET4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.33■■□□□ 1.17
RTL9Q8NET4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RTL9Q8NET4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RTL9Q8NET4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.33■■□□□ 1.17
RTL9Q8NET4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
RTL9Q8NET4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
RTL9Q8NET4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RTL9Q8NET4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RTL9Q8NET4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RTL9Q8NET4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL9Q8NET4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RTL9Q8NET4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTL9Q8NET4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL9Q8NET4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL9Q8NET4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL9Q8NET4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms