Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 AC104076.2-201ENST00000448912 469 ntBASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 AL512604.3-201ENST00000569583 964 ntBASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 AC010240.3-201ENST00000607688 395 ntBASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 KRT8P7-201ENST00000533003 1432 ntBASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 AC106820.2-201ENST00000563775 3264 ntBASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SIMC1Q8NDZ2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 YBX1P2-201ENST00000489612 999 ntBASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 AL157888.1-201ENST00000631930 593 ntBASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SIMC1Q8NDZ2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 AL354751.1-201ENST00000412768 1863 ntBASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 COX11P1-201ENST00000489116 835 ntBASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIMC1Q8NDZ2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIMC1Q8NDZ2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms