Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LSMEM1Q8N8F7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 AC008894.3-201ENST00000624324 3103 ntBASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 SEC1P-202ENST00000473944 940 ntBASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LSMEM1Q8N8F7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 AC099343.3-201ENST00000605834 2503 ntBASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 AL596275.1-201ENST00000423464 877 ntBASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 ECEL1P2-202ENST00000465689 757 ntBASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LSMEM1Q8N8F7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSMEM1Q8N8F7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms