Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 MIR3180-5-201ENST00000583743 153 ntBASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN22Q8N7P3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 AC009102.3-201ENST00000623118 1491 ntBASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN22Q8N7P3 AC124067.4-201ENST00000519691 2379 ntBASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 AL163051.1-201ENST00000569214 1512 ntBASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 SDHAP2-201ENST00000455183 2001 ntBASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 AC036111.1-201ENST00000533973 1582 ntBASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN22Q8N7P3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 AL390955.1-201ENST00000428694 934 ntBASIC16.59■□□□□ 0.25
CLDN22Q8N7P3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms