Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 TFPT-201ENST00000391757 774 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 AC099791.2-201ENST00000605725 427 ntBASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 MYC-208ENST00000641036 567 ntBASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2BBQ8N257 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HIST3H2BBQ8N257 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
HIST3H2BBQ8N257 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HIST3H2BBQ8N257 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.58□□□□□ -0.23
HIST3H2BBQ8N257 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 PVT1_1.1-201ENST00000615125 194 ntBASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 HEIH-201ENST00000623091 1652 ntBASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 AL009178.2-201ENST00000597278 2719 ntBASIC13.58□□□□□ -0.24
HIST3H2BBQ8N257 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms