Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 AC073508.3-201ENST00000619697 1419 ntBASIC17.59■□□□□ 0.41
KRT78Q8N1N4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT78Q8N1N4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT78Q8N1N4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT78Q8N1N4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
KRT78Q8N1N4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
KRT78Q8N1N4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT78Q8N1N4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT78Q8N1N4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
KRT78Q8N1N4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT78Q8N1N4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT78Q8N1N4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT78Q8N1N4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.58■□□□□ 0.41
KRT78Q8N1N4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.58■□□□□ 0.4
KRT78Q8N1N4 AL157888.1-201ENST00000631930 593 ntBASIC17.58■□□□□ 0.4
KRT78Q8N1N4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT78Q8N1N4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms