Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 AC132008.2-207ENST00000454517 770 ntBASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 AL691403.2-201ENST00000618460 490 ntBASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 AL591424.1-201ENST00000442569 1213 ntBASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 KRT18P41-201ENST00000518924 1277 ntBASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 YBX2P1-201ENST00000394192 760 ntBASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 AC098831.1-202ENST00000438821 336 ntBASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 AC104390.1-201ENST00000555663 520 ntBASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 AC106730.1-201ENST00000566722 1090 ntBASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RP1L1Q8IWN7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 AC005336.2-201ENST00000593183 939 ntBASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 AC114341.1-201ENST00000618070 349 ntBASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 AC104109.2-201ENST00000602919 1418 ntBASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 NUS1P2-201ENST00000417358 873 ntBASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 MED15P5-201ENST00000423150 992 ntBASIC16.47■□□□□ 0.23
RP1L1Q8IWN7 RNA5SP415-201ENST00000517246 115 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms