Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
APLFQ8IW19 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APLFQ8IW19 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APLFQ8IW19 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APLFQ8IW19 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.07■□□□□ 0.48
APLFQ8IW19 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
APLFQ8IW19 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.07■□□□□ 0.48
APLFQ8IW19 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 AC117947.1-201ENST00000427448 529 ntBASIC18.07■□□□□ 0.48
APLFQ8IW19 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.07■□□□□ 0.48
APLFQ8IW19 MFAP1P1-201ENST00000442257 1255 ntBASIC18.07■□□□□ 0.48
APLFQ8IW19 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.07■□□□□ 0.48
APLFQ8IW19 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.07■□□□□ 0.48
APLFQ8IW19 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
APLFQ8IW19 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.07■□□□□ 0.48
APLFQ8IW19 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.07■□□□□ 0.48
APLFQ8IW19 AL138966.2-201ENST00000621997 464 ntBASIC18.07■□□□□ 0.48
APLFQ8IW19 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
APLFQ8IW19 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.07■□□□□ 0.48
APLFQ8IW19 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
APLFQ8IW19 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.07■□□□□ 0.48
APLFQ8IW19 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.07■□□□□ 0.48
APLFQ8IW19 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APLFQ8IW19 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.07■□□□□ 0.48
APLFQ8IW19 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.07■□□□□ 0.48
APLFQ8IW19 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
APLFQ8IW19 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.06■□□□□ 0.48
APLFQ8IW19 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
APLFQ8IW19 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 FAM207BP-201ENST00000447172 505 ntBASIC18.06■□□□□ 0.48
APLFQ8IW19 AC008040.2-201ENST00000461049 708 ntBASIC18.06■□□□□ 0.48
APLFQ8IW19 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.06■□□□□ 0.48
APLFQ8IW19 AC091390.4-202ENST00000476426 537 ntBASIC18.06■□□□□ 0.48
APLFQ8IW19 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.06■□□□□ 0.48
APLFQ8IW19 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
APLFQ8IW19 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
APLFQ8IW19 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.06■□□□□ 0.48
APLFQ8IW19 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.06■□□□□ 0.48
APLFQ8IW19 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
APLFQ8IW19 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.06■□□□□ 0.48
APLFQ8IW19 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
APLFQ8IW19 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
APLFQ8IW19 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 AC018695.7-201ENST00000624587 2492 ntBASIC18.06■□□□□ 0.48
APLFQ8IW19 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
APLFQ8IW19 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.05■□□□□ 0.48
APLFQ8IW19 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
APLFQ8IW19 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.05■□□□□ 0.48
APLFQ8IW19 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms