Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 AL158211.5-201ENST00000623583 2518 ntBASIC19.66■□□□□ 0.74
HERC6Q8IVU3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 KRT18P3-201ENST00000451602 1288 ntBASIC19.66■□□□□ 0.74
HERC6Q8IVU3 KRT18P41-201ENST00000518924 1277 ntBASIC19.66■□□□□ 0.74
HERC6Q8IVU3 AC027796.2-201ENST00000575326 344 ntBASIC19.66■□□□□ 0.74
HERC6Q8IVU3 LINC02084-201ENST00000606069 1096 ntBASIC19.66■□□□□ 0.74
HERC6Q8IVU3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HERC6Q8IVU3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 YBX2P1-201ENST00000394192 760 ntBASIC19.65■□□□□ 0.74
HERC6Q8IVU3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 RPS8P6-201ENST00000426177 609 ntBASIC19.65■□□□□ 0.74
HERC6Q8IVU3 AC112482.1-201ENST00000492080 688 ntBASIC19.65■□□□□ 0.74
HERC6Q8IVU3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 RNA5SP415-201ENST00000517246 115 ntBASIC19.65■□□□□ 0.74
HERC6Q8IVU3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 OR7E14P-202ENST00000530490 1290 ntBASIC19.65■□□□□ 0.74
HERC6Q8IVU3 AC012640.2-201ENST00000561606 901 ntBASIC19.65■□□□□ 0.74
HERC6Q8IVU3 MIR3687-2-201ENST00000577708 61 ntBASIC19.65■□□□□ 0.74
HERC6Q8IVU3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 AC011467.2-201ENST00000598425 242 ntBASIC19.65■□□□□ 0.74
HERC6Q8IVU3 MIR3687-1-201ENST00000614492 61 ntBASIC19.65■□□□□ 0.74
HERC6Q8IVU3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HERC6Q8IVU3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HERC6Q8IVU3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
HERC6Q8IVU3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERC6Q8IVU3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERC6Q8IVU3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HERC6Q8IVU3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 ABCD1P5-201ENST00000445663 754 ntBASIC19.64■□□□□ 0.73
HERC6Q8IVU3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 AL138831.2-201ENST00000606564 490 ntBASIC19.64■□□□□ 0.73
HERC6Q8IVU3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 AC083906.6-201ENST00000641366 219 ntBASIC19.64■□□□□ 0.73
HERC6Q8IVU3 AC079781.4-201ENST00000641908 219 ntBASIC19.64■□□□□ 0.73
HERC6Q8IVU3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HERC6Q8IVU3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms