Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC026471.5-201ENST00000615068 467 ntBASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC50Q8IVM0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 CA15P1-201ENST00000481698 905 ntBASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 MIR3180-5-201ENST00000583743 153 ntBASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 AC106820.2-201ENST00000563775 3264 ntBASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC50Q8IVM0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 AC036111.1-201ENST00000533973 1582 ntBASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 KRT8P50-201ENST00000562022 1438 ntBASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC50Q8IVM0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 AC008764.6-201ENST00000595909 2069 ntBASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 AC009053.2-201ENST00000563701 2365 ntBASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 GMCL1P1-201ENST00000463439 1581 ntBASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC50Q8IVM0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC50Q8IVM0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms