Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD2Q8IV50 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD2Q8IV50 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD2Q8IV50 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
LYSMD2Q8IV50 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LYSMD2Q8IV50 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD2Q8IV50 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYSMD2Q8IV50 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
LYSMD2Q8IV50 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 AC073210.2-201ENST00000430369 194 ntBASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 AC034268.1-201ENST00000441047 882 ntBASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 AC124283.5-201ENST00000624661 1809 ntBASIC16.01■□□□□ 0.15
LYSMD2Q8IV50 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 AL138688.1-201ENST00000624851 1594 ntBASIC16■□□□□ 0.15
LYSMD2Q8IV50 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 GAS2L1P1-201ENST00000420145 1480 ntBASIC16■□□□□ 0.15
LYSMD2Q8IV50 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 LSM12P1-201ENST00000411836 588 ntBASIC16■□□□□ 0.15
LYSMD2Q8IV50 AL390719.1-204ENST00000412397 1219 ntBASIC16■□□□□ 0.15
LYSMD2Q8IV50 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 KRT8P45-201ENST00000414328 1447 ntBASIC16■□□□□ 0.15
LYSMD2Q8IV50 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LYSMD2Q8IV50 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LYSMD2Q8IV50 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 AC005829.2-201ENST00000571422 1056 ntBASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYSMD2Q8IV50 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms