Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 AC104390.1-201ENST00000555663 520 ntBASIC17.4■□□□□ 0.38
RAB43Q86YS6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 MIR3652-201ENST00000579335 131 ntBASIC17.4■□□□□ 0.38
RAB43Q86YS6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 AC010240.3-201ENST00000607688 395 ntBASIC17.4■□□□□ 0.38
RAB43Q86YS6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 AL391807.1-203ENST00000604392 2365 ntBASIC17.4■□□□□ 0.38
RAB43Q86YS6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 AL162741.1-201ENST00000565563 1558 ntBASIC17.4■□□□□ 0.38
RAB43Q86YS6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.4■□□□□ 0.38
RAB43Q86YS6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB43Q86YS6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB43Q86YS6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.39■□□□□ 0.38
RAB43Q86YS6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB43Q86YS6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAB43Q86YS6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB43Q86YS6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAB43Q86YS6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RAB43Q86YS6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 MIR564-202ENST00000385049 94 ntBASIC17.39■□□□□ 0.37
RAB43Q86YS6 TPM4P1-201ENST00000436100 807 ntBASIC17.39■□□□□ 0.37
RAB43Q86YS6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.39■□□□□ 0.37
RAB43Q86YS6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RAB43Q86YS6 KRT8P26-201ENST00000534154 1276 ntBASIC17.39■□□□□ 0.37
RAB43Q86YS6 PRELID1P1-202ENST00000567272 903 ntBASIC17.39■□□□□ 0.37
RAB43Q86YS6 AL121894.2-201ENST00000602977 491 ntBASIC17.39■□□□□ 0.37
RAB43Q86YS6 AC079602.3-201ENST00000623931 403 ntBASIC17.39■□□□□ 0.37
RAB43Q86YS6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB43Q86YS6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB43Q86YS6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RAB43Q86YS6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
RAB43Q86YS6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 AC135050.7-201ENST00000624508 2218 ntBASIC17.39■□□□□ 0.37
RAB43Q86YS6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB43Q86YS6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 KRT8P32-201ENST00000512863 1461 ntBASIC17.38■□□□□ 0.37
RAB43Q86YS6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 AC034236.2-201ENST00000606662 1610 ntBASIC17.38■□□□□ 0.37
RAB43Q86YS6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB43Q86YS6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB43Q86YS6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms