Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 UNC93B2-201ENST00000285383 730 ntBASIC16.23■□□□□ 0.19
LRRC28Q86X40 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.23■□□□□ 0.19
LRRC28Q86X40 TNRC18P3-201ENST00000441896 2691 ntBASIC16.23■□□□□ 0.19
LRRC28Q86X40 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 AC108860.2-201ENST00000562760 2183 ntBASIC16.23■□□□□ 0.19
LRRC28Q86X40 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC28Q86X40 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRRC28Q86X40 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.22■□□□□ 0.19
LRRC28Q86X40 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.22■□□□□ 0.19
LRRC28Q86X40 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 RBM17P1-201ENST00000453646 1190 ntBASIC16.22■□□□□ 0.19
LRRC28Q86X40 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 MIR6786-201ENST00000616843 113 ntBASIC16.22■□□□□ 0.19
LRRC28Q86X40 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC28Q86X40 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC28Q86X40 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 FLJ13224-201ENST00000313737 1514 ntBASIC16.21■□□□□ 0.19
LRRC28Q86X40 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 AL160286.2-201ENST00000567150 934 ntBASIC16.21■□□□□ 0.19
LRRC28Q86X40 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC28Q86X40 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 AD000864.1-201ENST00000624076 2295 ntBASIC16.21■□□□□ 0.19
LRRC28Q86X40 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC28Q86X40 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms