Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 AC087499.1-201ENST00000418141 1075 ntBASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 KRT18P22-201ENST00000402024 1347 ntBASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD1LQ86WJ1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
CHD1LQ86WJ1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 AC145285.6-201ENST00000604632 637 ntBASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 AC132938.6-201ENST00000623828 1655 ntBASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 AC012317.2-201ENST00000623305 2251 ntBASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC22.51■■□□□ 1.19
CHD1LQ86WJ1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 AL138966.2-201ENST00000621997 464 ntBASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 KRT18P55-202ENST00000578578 1546 ntBASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 AC006116.8-202ENST00000587620 1550 ntBASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD1LQ86WJ1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 AL157888.1-201ENST00000631930 593 ntBASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 AC141257.4-201ENST00000634557 245 ntBASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 AC136944.6-201ENST00000634818 245 ntBASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 AC092865.7-201ENST00000641832 219 ntBASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CHD1LQ86WJ1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHD1LQ86WJ1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHD1LQ86WJ1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CHD1LQ86WJ1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC22.48■■□□□ 1.19
CHD1LQ86WJ1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CHD1LQ86WJ1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC22.48■■□□□ 1.19
CHD1LQ86WJ1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHD1LQ86WJ1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms