Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM1Q86UE6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM1Q86UE6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM1Q86UE6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM1Q86UE6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRRTM1Q86UE6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRTM1Q86UE6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRTM1Q86UE6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRRTM1Q86UE6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LRRTM1Q86UE6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.83■□□□□ 0.13
LRRTM1Q86UE6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.83■□□□□ 0.13
LRRTM1Q86UE6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM1Q86UE6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM1Q86UE6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM1Q86UE6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM1Q86UE6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM1Q86UE6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM1Q86UE6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRTM1Q86UE6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRTM1Q86UE6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 RNA5SP413-201ENST00000516373 109 ntBASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 CR392000.1-201ENST00000624770 1228 ntBASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 AL163051.1-201ENST00000569214 1512 ntBASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 AL023806.1-201ENST00000603994 1649 ntBASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRTM1Q86UE6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms