Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 AC108751.1-201ENST00000490852 363 ntBASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 AC113404.2-201ENST00000507884 177 ntBASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 AC021087.4-201ENST00000563761 564 ntBASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13BQ7Z7G8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 AL024508.2-201ENST00000607749 1894 ntBASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 AC012645.4-201ENST00000610691 1061 ntBASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 MIR149-201ENST00000384879 89 ntBASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13BQ7Z7G8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 NKAPP1-205ENST00000585790 367 ntBASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms