Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SHFQ7M4L6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.49■□□□□ 0.23
SHFQ7M4L6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.49■□□□□ 0.23
SHFQ7M4L6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.49■□□□□ 0.23
SHFQ7M4L6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.49■□□□□ 0.23
SHFQ7M4L6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.49■□□□□ 0.23
SHFQ7M4L6 RPPH1-201ENST00000516869 333 ntBASIC16.49■□□□□ 0.23
SHFQ7M4L6 CD99P1-205ENST00000527459 561 ntBASIC16.49■□□□□ 0.23
SHFQ7M4L6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.49■□□□□ 0.23
SHFQ7M4L6 PRORSD1P-202ENST00000563365 2154 ntBASIC16.49■□□□□ 0.23
SHFQ7M4L6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.49■□□□□ 0.23
SHFQ7M4L6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.49■□□□□ 0.23
SHFQ7M4L6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.49■□□□□ 0.23
SHFQ7M4L6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHFQ7M4L6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 MIR6786-201ENST00000616843 113 ntBASIC16.48■□□□□ 0.23
SHFQ7M4L6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 AC108860.2-201ENST00000562760 2183 ntBASIC16.48■□□□□ 0.23
SHFQ7M4L6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.48■□□□□ 0.23
SHFQ7M4L6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 FSCN1P1-201ENST00000568912 1481 ntBASIC16.48■□□□□ 0.23
SHFQ7M4L6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHFQ7M4L6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SHFQ7M4L6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 PHGDH-209ENST00000641074 1780 ntBASIC16.47■□□□□ 0.23
SHFQ7M4L6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SHFQ7M4L6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.47■□□□□ 0.23
SHFQ7M4L6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
SHFQ7M4L6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SHFQ7M4L6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SHFQ7M4L6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.47■□□□□ 0.23
SHFQ7M4L6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SHFQ7M4L6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SHFQ7M4L6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SHFQ7M4L6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SHFQ7M4L6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHFQ7M4L6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms