Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MIR4674-201ENST00000582457 87 ntBASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHMP1BQ7LBR1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 AC034232.1-201ENST00000506026 1064 ntBASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 AL109659.2-201ENST00000606809 1674 ntBASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHMP1BQ7LBR1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.79■□□□□ 0.28
CHMP1BQ7LBR1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms