Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 MIR6786-201ENST00000616843 113 ntBASIC16.84■□□□□ 0.29
TUBA1AQ71U36 AC011298.2-201ENST00000617989 482 ntBASIC16.84■□□□□ 0.29
TUBA1AQ71U36 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBA1AQ71U36 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TUBA1AQ71U36 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TUBA1AQ71U36 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TUBA1AQ71U36 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 MESTP1-201ENST00000404287 994 ntBASIC16.83■□□□□ 0.28
TUBA1AQ71U36 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 AC008040.2-201ENST00000461049 708 ntBASIC16.83■□□□□ 0.28
TUBA1AQ71U36 B3GAT3P1-201ENST00000471720 806 ntBASIC16.83■□□□□ 0.28
TUBA1AQ71U36 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 AD000864.1-201ENST00000624076 2295 ntBASIC16.83■□□□□ 0.28
TUBA1AQ71U36 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1AQ71U36 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 AC138028.4-201ENST00000564984 1845 ntBASIC16.82■□□□□ 0.28
TUBA1AQ71U36 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 LINC01126-201ENST00000623515 1646 ntBASIC16.82■□□□□ 0.28
TUBA1AQ71U36 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1AQ71U36 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TUBA1AQ71U36 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms