Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF220Q5VTB9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 RN7SL471P-201ENST00000580476 299 ntBASIC17.58■□□□□ 0.4
RNF220Q5VTB9 AC073648.6-201ENST00000641589 218 ntBASIC17.58■□□□□ 0.4
RNF220Q5VTB9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF220Q5VTB9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 AC008741.2-201ENST00000612792 3115 ntBASIC17.57■□□□□ 0.4
RNF220Q5VTB9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 AC110285.5-201ENST00000611501 352 ntBASIC17.57■□□□□ 0.4
RNF220Q5VTB9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF220Q5VTB9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.56■□□□□ 0.4
RNF220Q5VTB9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 TSPY23P-201ENST00000440136 739 ntBASIC17.56■□□□□ 0.4
RNF220Q5VTB9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 AC006058.3-201ENST00000606217 1069 ntBASIC17.56■□□□□ 0.4
RNF220Q5VTB9 AL445675.2-201ENST00000620291 557 ntBASIC17.56■□□□□ 0.4
RNF220Q5VTB9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 KRT8P41-201ENST00000533985 1514 ntBASIC17.56■□□□□ 0.4
RNF220Q5VTB9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms