Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC006557.2-201ENST00000592985 1240 ntBASIC22.86■■□□□ 1.25
RC3H1Q5TC82 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 AC096633.1-201ENST00000422446 749 ntBASIC22.85■■□□□ 1.25
RC3H1Q5TC82 BX005266.1-201ENST00000473402 457 ntBASIC22.85■■□□□ 1.25
RC3H1Q5TC82 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 AD001527.2-201ENST00000622994 785 ntBASIC22.85■■□□□ 1.25
RC3H1Q5TC82 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 AL049812.1-201ENST00000432563 2267 ntBASIC22.85■■□□□ 1.25
RC3H1Q5TC82 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RC3H1Q5TC82 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 PCDHAC2-203ENST00000615316 3011 ntBASIC22.84■■□□□ 1.25
RC3H1Q5TC82 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.84■■□□□ 1.25
RC3H1Q5TC82 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 MCCD1P2-201ENST00000423228 335 ntBASIC22.84■■□□□ 1.25
RC3H1Q5TC82 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 AC122714.2-201ENST00000502787 707 ntBASIC22.84■■□□□ 1.25
RC3H1Q5TC82 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 AC064836.3-201ENST00000607928 673 ntBASIC22.84■■□□□ 1.25
RC3H1Q5TC82 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.84■■□□□ 1.25
RC3H1Q5TC82 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 SIGLEC16-201ENST00000599858 1437 ntBASIC22.83■■□□□ 1.25
RC3H1Q5TC82 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 MIR1199-201ENST00000621445 119 ntBASIC22.83■■□□□ 1.25
RC3H1Q5TC82 AC005593.1-201ENST00000624894 515 ntBASIC22.83■■□□□ 1.25
RC3H1Q5TC82 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
RC3H1Q5TC82 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.83■■□□□ 1.24
RC3H1Q5TC82 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RC3H1Q5TC82 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 AC007952.6-201ENST00000573168 2673 ntBASIC22.82■■□□□ 1.24
RC3H1Q5TC82 AC003957.1-201ENST00000625108 2673 ntBASIC22.82■■□□□ 1.24
RC3H1Q5TC82 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 AL499627.1-201ENST00000569373 2188 ntBASIC22.82■■□□□ 1.24
RC3H1Q5TC82 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RC3H1Q5TC82 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms