Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6AP1LQ52LC2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6AP1LQ52LC2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6AP1LQ52LC2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6AP1LQ52LC2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6AP1LQ52LC2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.65■□□□□ 0.42
ATP6AP1LQ52LC2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATP6AP1LQ52LC2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ATP6AP1LQ52LC2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 RPS2P55-201ENST00000397318 883 ntBASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 AC107956.1-201ENST00000494359 873 ntBASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 AC142381.4-202ENST00000563973 229 ntBASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 MIR4674-201ENST00000582457 87 ntBASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6AP1LQ52LC2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 ABHD17AP1-201ENST00000358206 933 ntBASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 AC012618.2-201ENST00000428058 849 ntBASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 UBE2SP1-201ENST00000450587 669 ntBASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 REXO1L10P-201ENST00000615707 1290 ntBASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 REXO1L12P-201ENST00000622156 912 ntBASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6AP1LQ52LC2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 AL355355.2-201ENST00000442321 338 ntBASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 TSPY20P-201ENST00000450910 630 ntBASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 KRT8P7-201ENST00000533003 1432 ntBASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 HOXB1-202ENST00000577092 1414 ntBASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP6AP1LQ52LC2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms