Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AC145285.3-201ENST00000564603 959 ntBASIC19.83■□□□□ 0.77
TRIM71Q2Q1W2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM71Q2Q1W2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.83■□□□□ 0.76
TRIM71Q2Q1W2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM71Q2Q1W2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM71Q2Q1W2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM71Q2Q1W2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM71Q2Q1W2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 RPS2P1-201ENST00000434010 821 ntBASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 AC012640.2-201ENST00000561606 901 ntBASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 TERC-201ENST00000602385 541 ntBASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 AC025062.2-201ENST00000605477 670 ntBASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRIM71Q2Q1W2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 RPS2P28-201ENST00000314255 741 ntBASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 AC112698.1-201ENST00000510299 916 ntBASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 PGAM5P1-201ENST00000518923 814 ntBASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 AC092865.5-201ENST00000545435 363 ntBASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 ZNF259P1-201ENST00000407656 1365 ntBASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.81■□□□□ 0.76
TRIM71Q2Q1W2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 MIR940-201ENST00000401276 94 ntBASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM71Q2Q1W2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 AL356309.3-201ENST00000624132 1934 ntBASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM71Q2Q1W2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms