Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 AC023511.2-201ENST00000618803 211 ntBASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 AF228730.7-201ENST00000641842 219 ntBASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 IL9RP2-201ENST00000423948 1312 ntBASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHROOM1Q2M3G4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 ESPNP-201ENST00000270691 2015 ntBASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 AL031284.1-201ENST00000419297 478 ntBASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 KRT18P67-201ENST00000432816 1264 ntBASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 AC018712.1-201ENST00000455767 687 ntBASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 AP001005.1-201ENST00000571755 1248 ntBASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 BX640515.1-201ENST00000617215 977 ntBASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 AL773604.1-201ENST00000617417 272 ntBASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM1Q2M3G4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 AL355877.3-201ENST00000622820 899 ntBASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.18■□□□□ 0.98
SHROOM1Q2M3G4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 MTDHP3-201ENST00000594186 672 ntBASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM1Q2M3G4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHROOM1Q2M3G4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SHROOM1Q2M3G4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms