Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 HEIH-201ENST00000623091 1652 ntBASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 CRYGEP-201ENST00000412192 528 ntBASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 AL031432.2-201ENST00000566714 459 ntBASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 AC018845.2-201ENST00000568326 409 ntBASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 AL928711.1-201ENST00000570165 459 ntBASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO4Q2I0M5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RSPO4Q2I0M5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.58■□□□□ 0.41
RSPO4Q2I0M5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RSPO4Q2I0M5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RSPO4Q2I0M5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.58■□□□□ 0.41
RSPO4Q2I0M5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.41
RSPO4Q2I0M5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.58■□□□□ 0.41
RSPO4Q2I0M5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.58■□□□□ 0.4
RSPO4Q2I0M5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 GPR89P-201ENST00000407924 1495 ntBASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 AC125634.1-201ENST00000438758 1403 ntBASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 KRT18P27-201ENST00000427733 1299 ntBASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 AC006557.2-201ENST00000592985 1240 ntBASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.57■□□□□ 0.4
RSPO4Q2I0M5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 AIRN-201ENST00000601203 4374 ntBASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 MRPL20P1-201ENST00000400819 433 ntBASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms