Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 AC007663.1-201ENST00000438948 1240 ntBASIC12.07□□□□□ -0.48
SYCNQ0VAF6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 CR769767.2-201ENST00000622735 460 ntBASIC12.07□□□□□ -0.48
SYCNQ0VAF6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SYCNQ0VAF6 AC135776.1-201ENST00000319817 2481 ntBASIC12.06□□□□□ -0.48
SYCNQ0VAF6 AL163051.1-201ENST00000569214 1512 ntBASIC12.06□□□□□ -0.48
SYCNQ0VAF6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 TSPY14P-201ENST00000303979 915 ntBASIC12.06□□□□□ -0.48
SYCNQ0VAF6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 MIR149-201ENST00000384879 89 ntBASIC12.06□□□□□ -0.48
SYCNQ0VAF6 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.06□□□□□ -0.48
SYCNQ0VAF6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 AL512604.3-201ENST00000569583 964 ntBASIC12.06□□□□□ -0.48
SYCNQ0VAF6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 AC112497.1-201ENST00000624824 639 ntBASIC12.06□□□□□ -0.48
SYCNQ0VAF6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 AC009102.3-201ENST00000623118 1491 ntBASIC12.06□□□□□ -0.48
SYCNQ0VAF6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYCNQ0VAF6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 MMP23A-201ENST00000234610 1017 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms