Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 KRT8P32-201ENST00000512863 1461 ntBASIC16.42■□□□□ 0.22
SLC3A1Q07837 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC3A1Q07837 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SLC3A1Q07837 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC3A1Q07837 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SLC3A1Q07837 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC3A1Q07837 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC3A1Q07837 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC3A1Q07837 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC3A1Q07837 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 AC026271.3-201ENST00000571884 352 ntBASIC16.42■□□□□ 0.22
SLC3A1Q07837 AC131212.4-201ENST00000623606 975 ntBASIC16.42■□□□□ 0.22
SLC3A1Q07837 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC3A1Q07837 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SLC3A1Q07837 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 AC106820.2-201ENST00000563775 3264 ntBASIC16.42■□□□□ 0.22
SLC3A1Q07837 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC3A1Q07837 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC3A1Q07837 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 NUDT16P1-203ENST00000513809 620 ntBASIC16.41■□□□□ 0.22
SLC3A1Q07837 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC3A1Q07837 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC3A1Q07837 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 KRT8P45-201ENST00000414328 1447 ntBASIC16.4■□□□□ 0.22
SLC3A1Q07837 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 AP003071.4-201ENST00000562276 1284 ntBASIC16.4■□□□□ 0.22
SLC3A1Q07837 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC3A1Q07837 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC3A1Q07837 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC3A1Q07837 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC3A1Q07837 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC3A1Q07837 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC3A1Q07837 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms