Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDR2Q01850 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.43■□□□□ 0.7
CDR2Q01850 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CDR2Q01850 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.43■□□□□ 0.7
CDR2Q01850 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.43■□□□□ 0.7
CDR2Q01850 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.43■□□□□ 0.7
CDR2Q01850 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CDR2Q01850 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.43■□□□□ 0.7
CDR2Q01850 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.43■□□□□ 0.7
CDR2Q01850 AC092865.7-201ENST00000641832 219 ntBASIC19.43■□□□□ 0.7
CDR2Q01850 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.43■□□□□ 0.7
CDR2Q01850 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDR2Q01850 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.43■□□□□ 0.7
CDR2Q01850 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CDR2Q01850 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDR2Q01850 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDR2Q01850 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.42■□□□□ 0.7
CDR2Q01850 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.42■□□□□ 0.7
CDR2Q01850 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.42■□□□□ 0.7
CDR2Q01850 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CDR2Q01850 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDR2Q01850 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.42■□□□□ 0.7
CDR2Q01850 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.42■□□□□ 0.7
CDR2Q01850 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.42■□□□□ 0.7
CDR2Q01850 SLC25A3P1-201ENST00000443844 931 ntBASIC19.42■□□□□ 0.7
CDR2Q01850 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDR2Q01850 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.42■□□□□ 0.7
CDR2Q01850 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CDR2Q01850 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDR2Q01850 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.42■□□□□ 0.7
CDR2Q01850 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDR2Q01850 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDR2Q01850 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.41■□□□□ 0.7
CDR2Q01850 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDR2Q01850 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.41■□□□□ 0.7
CDR2Q01850 AP000997.3-201ENST00000623333 2250 ntBASIC19.41■□□□□ 0.7
CDR2Q01850 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.41■□□□□ 0.7
CDR2Q01850 AC067852.2-201ENST00000590513 2313 ntBASIC19.41■□□□□ 0.7
CDR2Q01850 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDR2Q01850 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDR2Q01850 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDR2Q01850 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDR2Q01850 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDR2Q01850 AC090340.1-201ENST00000620778 4980 ntBASIC19.41■□□□□ 0.7
CDR2Q01850 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.41■□□□□ 0.7
CDR2Q01850 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDR2Q01850 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.41■□□□□ 0.7
CDR2Q01850 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.41■□□□□ 0.7
CDR2Q01850 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.41■□□□□ 0.7
CDR2Q01850 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CDR2Q01850 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.41■□□□□ 0.7
CDR2Q01850 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDR2Q01850 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDR2Q01850 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CDR2Q01850 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDR2Q01850 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.41■□□□□ 0.7
CDR2Q01850 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CDR2Q01850 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.41■□□□□ 0.7
CDR2Q01850 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.41■□□□□ 0.7
CDR2Q01850 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDR2Q01850 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDR2Q01850 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDR2Q01850 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms