Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
H3F3AP84243 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
H3F3AP84243 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.28■□□□□ 0.2
H3F3AP84243 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 NEFHP1-201ENST00000412845 2629 ntBASIC16.28■□□□□ 0.2
H3F3AP84243 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
H3F3AP84243 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.28■□□□□ 0.2
H3F3AP84243 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.28■□□□□ 0.2
H3F3AP84243 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.28■□□□□ 0.2
H3F3AP84243 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.28■□□□□ 0.2
H3F3AP84243 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
H3F3AP84243 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
H3F3AP84243 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
H3F3AP84243 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.28■□□□□ 0.2
H3F3AP84243 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
H3F3AP84243 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
H3F3AP84243 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
H3F3AP84243 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3AP84243 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
H3F3AP84243 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
H3F3AP84243 ABALON-201ENST00000629058 1903 ntBASIC16.27■□□□□ 0.2
H3F3AP84243 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.27■□□□□ 0.2
H3F3AP84243 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3AP84243 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.27■□□□□ 0.2
H3F3AP84243 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3AP84243 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3AP84243 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3AP84243 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
H3F3AP84243 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.27■□□□□ 0.2
H3F3AP84243 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3AP84243 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3AP84243 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.27■□□□□ 0.2
H3F3AP84243 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.27■□□□□ 0.2
H3F3AP84243 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3AP84243 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.27■□□□□ 0.2
H3F3AP84243 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.27■□□□□ 0.2
H3F3AP84243 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.27■□□□□ 0.2
H3F3AP84243 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
H3F3AP84243 AL136038.3-201ENST00000561909 1096 ntBASIC16.27■□□□□ 0.2
H3F3AP84243 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.27■□□□□ 0.2
H3F3AP84243 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.27■□□□□ 0.2
H3F3AP84243 AL121956.5-201ENST00000625261 221 ntBASIC16.27■□□□□ 0.2
H3F3AP84243 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H3F3AP84243 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
H3F3AP84243 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3AP84243 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3AP84243 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.27■□□□□ 0.19
H3F3AP84243 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3AP84243 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3AP84243 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3AP84243 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H3F3AP84243 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.27■□□□□ 0.19
H3F3AP84243 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.27■□□□□ 0.19
H3F3AP84243 AC093010.1-201ENST00000473625 1624 ntBASIC16.27■□□□□ 0.19
H3F3AP84243 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.26■□□□□ 0.19
H3F3AP84243 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.26■□□□□ 0.19
H3F3AP84243 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.26■□□□□ 0.19
H3F3AP84243 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
H3F3AP84243 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.26■□□□□ 0.19
H3F3AP84243 AL096828.2-201ENST00000567259 1965 ntBASIC16.26■□□□□ 0.19
H3F3AP84243 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
H3F3AP84243 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
H3F3AP84243 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.26■□□□□ 0.19
H3F3AP84243 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.26■□□□□ 0.19
H3F3AP84243 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 VENTXP5-201ENST00000523979 775 ntBASIC16.26■□□□□ 0.19
H3F3AP84243 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.26■□□□□ 0.19
H3F3AP84243 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.26■□□□□ 0.19
H3F3AP84243 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
H3F3AP84243 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
H3F3AP84243 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
H3F3AP84243 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3F3AP84243 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms