Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN5P54829 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PTPN5P54829 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN5P54829 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN5P54829 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.79■□□□□ 0.6
PTPN5P54829 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN5P54829 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN5P54829 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN5P54829 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN5P54829 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PTPN5P54829 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN5P54829 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PTPN5P54829 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN5P54829 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN5P54829 KRT18P3-201ENST00000451602 1288 ntBASIC18.79■□□□□ 0.6
PTPN5P54829 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN5P54829 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN5P54829 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN5P54829 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN5P54829 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN5P54829 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN5P54829 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.79■□□□□ 0.6
PTPN5P54829 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PTPN5P54829 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PTPN5P54829 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN5P54829 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN5P54829 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN5P54829 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN5P54829 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN5P54829 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN5P54829 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN5P54829 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTPN5P54829 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PTPN5P54829 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 COX20P2-201ENST00000452636 358 ntBASIC18.78■□□□□ 0.6
PTPN5P54829 MIR3180-5-201ENST00000583743 153 ntBASIC18.78■□□□□ 0.6
PTPN5P54829 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN5P54829 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN5P54829 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 GPAT2P1-201ENST00000444924 1672 ntBASIC18.78■□□□□ 0.6
PTPN5P54829 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN5P54829 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 AC006333.2-201ENST00000607957 2099 ntBASIC18.78■□□□□ 0.6
PTPN5P54829 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN5P54829 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN5P54829 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN5P54829 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN5P54829 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN5P54829 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN5P54829 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PTPN5P54829 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PTPN5P54829 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN5P54829 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN5P54829 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN5P54829 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PTPN5P54829 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN5P54829 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN5P54829 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.77■□□□□ 0.6
PTPN5P54829 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PTPN5P54829 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN5P54829 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN5P54829 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN5P54829 AC011467.4-201ENST00000594891 528 ntBASIC18.77■□□□□ 0.6
PTPN5P54829 GPR32P1-201ENST00000601788 811 ntBASIC18.77■□□□□ 0.6
PTPN5P54829 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN5P54829 AC068587.9-201ENST00000641814 219 ntBASIC18.77■□□□□ 0.6
PTPN5P54829 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PTPN5P54829 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PTPN5P54829 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN5P54829 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
PTPN5P54829 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.77■□□□□ 0.59
PTPN5P54829 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN5P54829 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN5P54829 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN5P54829 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN5P54829 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN5P54829 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
PTPN5P54829 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN5P54829 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PTPN5P54829 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN5P54829 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.76■□□□□ 0.59
PTPN5P54829 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.76■□□□□ 0.59
PTPN5P54829 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN5P54829 IGHV3-22-201ENST00000520721 359 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms