Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.83■□□□□ 0.12
ATP1B3P54709 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATP1B3P54709 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.83■□□□□ 0.12
ATP1B3P54709 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.83■□□□□ 0.12
ATP1B3P54709 REXO1L10P-201ENST00000615707 1290 ntBASIC15.83■□□□□ 0.12
ATP1B3P54709 REXO1L12P-201ENST00000622156 912 ntBASIC15.83■□□□□ 0.12
ATP1B3P54709 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.83■□□□□ 0.12
ATP1B3P54709 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATP1B3P54709 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
ATP1B3P54709 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATP1B3P54709 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.83■□□□□ 0.12
ATP1B3P54709 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
ATP1B3P54709 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.83■□□□□ 0.12
ATP1B3P54709 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
ATP1B3P54709 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ATP1B3P54709 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.82■□□□□ 0.12
ATP1B3P54709 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ATP1B3P54709 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ATP1B3P54709 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ATP1B3P54709 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.82■□□□□ 0.12
ATP1B3P54709 MIR3180-5-201ENST00000583743 153 ntBASIC15.82■□□□□ 0.12
ATP1B3P54709 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
ATP1B3P54709 AC026471.5-201ENST00000615068 467 ntBASIC15.82■□□□□ 0.12
ATP1B3P54709 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP1B3P54709 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ATP1B3P54709 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP1B3P54709 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ATP1B3P54709 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ATP1B3P54709 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ATP1B3P54709 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
ATP1B3P54709 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.82■□□□□ 0.12
ATP1B3P54709 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP1B3P54709 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP1B3P54709 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ATP1B3P54709 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP1B3P54709 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
ATP1B3P54709 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP1B3P54709 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP1B3P54709 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP1B3P54709 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
ATP1B3P54709 LINC00896-202ENST00000609602 2128 ntBASIC15.81■□□□□ 0.12
ATP1B3P54709 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ATP1B3P54709 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP1B3P54709 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ATP1B3P54709 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ATP1B3P54709 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP1B3P54709 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 AC093677.2-201ENST00000600169 1863 ntBASIC15.8■□□□□ 0.12
ATP1B3P54709 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ATP1B3P54709 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms