Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CLCN3P51790 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.97■□□□□ 0.79
CLCN3P51790 KRT16P4-201ENST00000453883 522 ntBASIC19.97■□□□□ 0.79
CLCN3P51790 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCN3P51790 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.97■□□□□ 0.79
CLCN3P51790 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCN3P51790 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN3P51790 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLCN3P51790 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLCN3P51790 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCN3P51790 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLCN3P51790 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCN3P51790 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 AKR1C7P-201ENST00000305623 895 ntBASIC19.96■□□□□ 0.79
CLCN3P51790 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.96■□□□□ 0.79
CLCN3P51790 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.96■□□□□ 0.79
CLCN3P51790 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CLCN3P51790 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.96■□□□□ 0.79
CLCN3P51790 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN3P51790 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.95■□□□□ 0.79
CLCN3P51790 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCN3P51790 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCN3P51790 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CLCN3P51790 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.95■□□□□ 0.78
CLCN3P51790 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCN3P51790 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCN3P51790 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLCN3P51790 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CLCN3P51790 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCN3P51790 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCN3P51790 AC009078.2-202ENST00000463353 338 ntBASIC19.95■□□□□ 0.78
CLCN3P51790 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.95■□□□□ 0.78
CLCN3P51790 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.95■□□□□ 0.78
CLCN3P51790 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLCN3P51790 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.95■□□□□ 0.78
CLCN3P51790 AC104692.2-201ENST00000603054 253 ntBASIC19.95■□□□□ 0.78
CLCN3P51790 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLCN3P51790 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CLCN3P51790 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CLCN3P51790 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN3P51790 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN3P51790 AC018445.3-201ENST00000624177 1945 ntBASIC19.94■□□□□ 0.78
CLCN3P51790 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLCN3P51790 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLCN3P51790 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN3P51790 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLCN3P51790 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN3P51790 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms