Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLCN2P51788 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLCN2P51788 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCN2P51788 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLCN2P51788 AC092338.2-201ENST00000568827 1415 ntBASIC17.66■□□□□ 0.42
CLCN2P51788 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCN2P51788 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CLCN2P51788 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLCN2P51788 AC090340.1-201ENST00000620778 4980 ntBASIC17.66■□□□□ 0.42
CLCN2P51788 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CLCN2P51788 HMGA1P5-201ENST00000412453 271 ntBASIC17.66■□□□□ 0.42
CLCN2P51788 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLCN2P51788 AC007663.1-201ENST00000438948 1240 ntBASIC17.66■□□□□ 0.42
CLCN2P51788 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.66■□□□□ 0.42
CLCN2P51788 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.66■□□□□ 0.42
CLCN2P51788 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.66■□□□□ 0.42
CLCN2P51788 AL023803.3-201ENST00000615559 522 ntBASIC17.66■□□□□ 0.42
CLCN2P51788 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLCN2P51788 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCN2P51788 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CLCN2P51788 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CLCN2P51788 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCN2P51788 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLCN2P51788 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN2P51788 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CLCN2P51788 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CLCN2P51788 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCN2P51788 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLCN2P51788 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CLCN2P51788 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCN2P51788 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 INGX-201ENST00000359239 846 ntBASIC17.65■□□□□ 0.42
CLCN2P51788 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCN2P51788 AC005521.1-201ENST00000393351 872 ntBASIC17.65■□□□□ 0.42
CLCN2P51788 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN2P51788 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCN2P51788 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN2P51788 ATP5G1P1-201ENST00000448724 379 ntBASIC17.65■□□□□ 0.42
CLCN2P51788 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN2P51788 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCN2P51788 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLCN2P51788 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CLCN2P51788 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLCN2P51788 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN2P51788 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLCN2P51788 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.64■□□□□ 0.42
CLCN2P51788 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 RCN1P1-201ENST00000400413 996 ntBASIC17.64■□□□□ 0.41
CLCN2P51788 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.64■□□□□ 0.41
CLCN2P51788 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLCN2P51788 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CLCN2P51788 FAM87A-204ENST00000613235 858 ntBASIC17.64■□□□□ 0.41
CLCN2P51788 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CLCN2P51788 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CLCN2P51788 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCN2P51788 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLCN2P51788 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 AD000864.1-201ENST00000624076 2295 ntBASIC17.64■□□□□ 0.41
CLCN2P51788 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCN2P51788 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN2P51788 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLCN2P51788 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms